• Maintain and update 20yr legacy codebase of the Fungal and Algal Genomics team

• Rewrite, optimize, and merge annotator scripts into production code

• Build analytics pipelines for large scale genomic analysis in HPC environment

• Test and integrate third party tools and software to improve existing functionality

• Developed and managed a scalable suite of gene editing design tools

• Adopted and maintained a legacy LIMS through end of life

• Scaled computational biology scripts for whole-genome designs

• Refactored and developed algorithms from bioinformaticists into production code

• Developed clinical research APIs to leverage next generation sequencing data

• Created parsers for large scale ETL of clinical data

• Built an R package with researchers to integrate genomic APIs for analysis

Worked with a group of neuroscientists and a hardware team to design and implement a software/hardware testing suite for pharmaceutical research. We designed and implemented a context-free domain-specific language that would be readable by research scientists with no prior CS experience, as well as editable by those with a brief introduction to it. Additionally, we integrated with a hardware system that was custom built from scratch.